Publications

Publications
1 Pettit, R., Jaume, G., Peeters, T., Song, A., Williamson, D., Oldenburg, L., & … (2024). AI-Driven Discovery of Morphomolecular Signatures in Toxicology. JOURNAL OF MOLECULAR DIAGNOSTICS. 26 (11), S76-S76
2 Pettit, R.., Marlatt, BB., Miles, TJ., Uzgoren, S., Corr, SJ., Shetty, A., Havelka, J., & … (2023). The utility of machine learning for predicting donor discard in abdominal transplantation. Clinical transplantation. 37 (5), e14951
3 Pettit, R.., Byun, J., Han, Y., Ostrom, QT., Coarfa, C., Bondy, ML., & Amos, CI. (2023). Heritable traits and lung cancer risk: a two-sample mendelian randomization study. Cancer Epidemiology, Biomarkers & Prevention. 32 (10), 1421-1435
4 Pettit, R., Peng, B., Yu, P., Matos, PG., Greninger, AL., McCashin, J., & Amos, CI. (2023). Optimized workplace risk mitigation measures for SARS-CoV-2 in 2022. Scientific Reports. 13 (1), 2779
5 Pettit, R., Marlatt, B., Uzgoren, S., Havelka, J., Shetty, A., Cholankeril, G., & Rana, A. (2023). ACCURATE PREDICTION OF LIVER WAITLIST MORTALITY AND 1-YEAR POST-TRANSPLANT SURVIVAL WITH MACHINE LEARNING. The Liver Meeting. 2023
6 Pettit, R.., Marlatt, BB., Corr, SJ., Havelka, J., & Rana, A. (2022). nnU-Net deep learning method for segmenting parenchyma and determining liver volume from computed tomography images. Annals of Surgery Open. 3 (2), e155
7 Pettit, R.., Kaplan, J., Delancy, MM., Reece, E., Winocour, S., Offodile, AC., & … (2022). Industry payments to plastic surgeons: what has changed over the last 6 years following implementation of the physician payments sunshine act?. Aesthetic surgery journal. 42 (2), 210-221
8 Pettit, R.., & Amos, CI. (2022). Linkage disequilibrium score statistic regression for identifying novel trait associations. Current Epidemiology Reports. 9 (3), 190-199
9 Pettit, R.., & Amos, CI. (2022). Multiple outcome linkage disequilibrium score regression for confounding independent genetic correlations. Cancer Research. 82 (12_Supplement), 5041-5041
10 Pettit, R.., Fullem, R., Cheng, C., & Amos, CI. (2021). Artificial intelligence, machine learning, and deep learning for clinical outcome prediction. Emerging topics in life sciences. 5 (6), 729-745
11 Pettit, R.., Byun, J., Han, Y., Ostrom, QT., Edelson, J., Walsh, KM., Bondy, ML., & … (2021). The shared genetic architecture between epidemiological and behavioral traits with lung cancer. Scientific reports. 11 (1), 17559
12 Pettit, R., Peng, B., Yu, P., Matos, PG., Greninger, AL., McCashin, J., & Amos, CI. (2021). Optimized post-vaccination strategies and preventative measures for SARS-CoV-2. medRxiv.
13 Pettit, R.., Byun, J., Han, Y., Ostrom, QT., Hung, RJ., Mckay, JD., & Amos, CI. (2021). Smoking Dependent and Independent Causal Effects of Educational Ascertainment and Alcohol Use on Lung Cancer. GENETIC EPIDEMIOLOGY. 45 (7), 781-782
14 Pettit, R.., Corr, S., Havelka, J., & Rana, AA. (2020). Using artificial intelligence to improve post-transplant survival predictions. Journal of the American College of Surgeons. 231 (4), S302-S303
15 Pettit, R.., Byun, J., Han, Y., Edelson, J., Ostrom, Q., Walsh, K., Bondy, M., & … (2020). Genetic correlation between lung cancer and environmental exposures. Cancer Research. 80 (16_Supplement), 2121-2121
16 Pettit, R.., Corr, SJ., Havelka, J., & Rana, A. (2020). Machine Learning Model Outperforms Linear Regression Models for 1-and 3-Year Post-Transplant Survival: Is This the Future?. AMERICAN JOURNAL OF TRANSPLANTATION. 20, 669-669
17 Pettit, R.., & Jr, LH Hollier. (2020). Review of “Surgical Consultation as Social Process” by Clapp JT in Ann Surg 269: 446–452, 2019. Journal of Craniofacial Surgery. 31 (2), 594
18 Pettit, R.., Navarro, SM., Miles, TJ., Haeberle, HS., & Ramkumar, PN. (2018). RETURN-TO-PLAY AND THE SHORT-TERM IMPACT OF CONCUSSION IN MAJOR LEAGUE BASEBALL. JOURNAL OF NEUROTRAUMA. 35 (16), A254-A255
19 Shaw, VR., Byun, J., Zhu, C., Pettit, R.., Cohen, JM., Han, Y., & Amos, CI. (2025). Uncovering shared genetic features between inflammatory bowel disease and systemic lupus erythematosus. Scientific Reports. 15 (1), 15309
20 Shaw, VR., Byun, J., Pettit, R.., Hou, JK., Walsh, KM., Han, Y., & Amos, CI. (2024). An Atlas Characterizing the Shared Genetic Architecture of Inflammatory Bowel Disease with Clinical and Behavioral Traits. Inflammatory Bowel Diseases. 30 (6), 884-893
21 Jaume, G., Peeters, T., Song, AH., Pettit, R., Williamson, DFK., Oldenburg, L., & … (2024). AI-driven discovery of morphomolecular signatures in toxicology. bioRxiv.
22 Jaume, G., Brot, S de., Song, AH., Williamson, DFK., Oldenburg, L., Zhang, A., & … (2024). Deep Learning-based Modeling for Preclinical Drug Safety Assessment. bioRxiv.
23 II, OO Olutoye., Mehl, SC., Moturu, A., Pettit, R.., Coleman, RD., Vogel, AM., & … (2023). Risk stratification by percent liver herniation in congenital diaphragmatic hernia. Journal of Surgical Research. 282, 168-173
24 Shaw, VR., Byun, J., Pettit, R.., Han, Y., Hsiou, DA., Nordstrom, LA., & Amos, CI. (2023). A comprehensive analysis of lung cancer highlighting epidemiological factors and psychiatric comorbidities from the All of Us Research Program. Scientific Reports. 13 (1), 10852
25 Byun, J., Han, Y., Li, Y., Xia, J., Long, E., Choi, J., Xiao, X., Zhu, M., Zhou, W., Sun, R., & … (2022). Cross-ancestry genome-wide meta-analysis of 61,047 cases and 947,237 controls identifies new susceptibility loci contributing to lung cancer. Nature genetics. 54 (8), 1167-1177
26 Mehl, SC., Portuondo, JI., Pettit, R.., Fallon, SC., Wesson, DE., Shah, SR., & … (2022). Association of prematurity with complications and failure to rescue in neonatal surgery. Journal of pediatric surgery. 57 (10), 268-276
27 Mehl, SC., Portuondo, JI., Pettit, R.., Fallon, SC., Wesson, DE., Massarweh, NN., & … (2022). Association of red blood cell transfusion volume with postoperative complications and mortality in neonatal surgery. Journal of pediatric surgery. 57 (11), 492-500
28 Mehl, SC., Cunningham, ME., Streck, CJ., Pettit, R., Huang, EY., Santore, MT., & … (2022). Characteristics and predictors of intensive care unit admission in pediatric blunt abdominal trauma. Pediatric surgery international. 38 (4), 589-597
29 Peng, B., Zhou, W., Pettit, R.., Yu, P., Matos, PG., Greninger, AL., McCashin, J., & … (2021). Reducing COVID-19 quarantine with SARS-CoV-2 testing: a simulation study. BMJ open. 11 (7), e050473
30 Byun, J., Han, Y., Ostrom, QT., Edelson, J., Walsh, KM., Pettit, R.., Bondy, ML., & … (2021). The shared genetic architectures between lung cancer and multiple polygenic phenotypes in genome-wide association studies. Cancer Epidemiology, Biomarkers & Prevention. 30 (6), 1156-1164
31 Peng, B., Pettit, R.., & Amos, CI. (2021). Population simulations of COVID-19 outbreaks provide tools for risk assessment and continuity planning. JAMIA open. 4 (3), ooaa074
32 Marlatt, B., Pettit, R., Havelka, J., Corr, SJ., & Rana, A. (2021). Deep Learning Based Automatic Liver Volume Estimation and Segmentation via U-net Convolutional Neural Network. AMERICAN JOURNAL OF TRANSPLANTATION. 21, 797-797
33 Kripps, KA., Nakayuenyongsuk, W., Shayota, BJ., Berquist, W., & … (2020). Successful liver transplantation in mitochondrial neurogastrointestinal encephalomyopathy (MNGIE). Molecular genetics and metabolism. 130 (1), 58-64
34 Nicolescu, R., Agrawal, NA., Pettit, R.., & Netscher, DT. (2020). Recurrent schwannomatosis of the hand. Hand. 15 (5), NP73-NP79
35 Byun, J., Han, Y., Li, Y., Xia, J., Xiao, X., Sun, R., Walsh, KM., Gorlov, I., Gorlova, O., & … (2020). Trans-ethnic genome-wide meta-analysis of 35,732 cases and 34,424 controls identifies novel genomic cross-ancestry loci contributing to lung cancer susceptibility. medRxiv. 2020.10. 06.20207753
36 Peng, B., Zhou, W., Pettit, R.., Yu, P., Matos, PG., Greninger, AL., McCashin, J., & … (2020). Optimal test-assisted quarantine strategies for COVID-19. medRxiv. 2020.11. 06.20222398
37 Gravina, PR., Pettit, R.., Davis, MJ., Winocour, SJ., & Selber, JC. (2019). Evidence for the use of acellular dermal matrix in implant-based breast reconstruction. Seminars in plastic surgery. 33 (04), 229-235
38 Shayota, BJ., Kueht, M., Pettit, R., Sherif, Y., Emrick, L., Hirano, M., Elsea, SH., & … (2019). LIVER TRANSPLANTATION FOR THE TREATMENT OF MITOCHONDRIAL NEUROGASTROINTESTINAL ENCEPHALOPATHY (MNGIE): A CASE REPORT. MOLECULAR GENETICS AND METABOLISM. 126 (3), 327-327
39 Navarro, SM., Pettit, R.., Haeberle, HS., Frangiamore, SJ., Rahman, NM., & … (2018). Short-term impact of concussion in the NHL: an analysis of player longevity, performance, and financial loss. Journal of neurotrauma. 35 (20), 2391-2399
40 Ramkumar, PN., Navarro, SM., Haeberle, HS., Pettit, R.., Miles, TJ., & … (2018). Short-term outcomes of concussions in Major League Baseball: a historical cohort study of return to play, performance, longevity, and financial impact. Orthopaedic journal of sports medicine. 6 (12), 2325967118814238
41 Huie, JR. (2018). The 3rd joint symposium of the international and national neurotrauma societies and AANS/CNS Section on neurotrauma and critical care august 11-16, 2018 Toronto, Canada. J Neurotrauma. 35, A-154
42 Navarro, SM., Pettit, R.., Frankel, WC., Miles, TJ., & Ramkumar, PN. (2018). CONCUSSION IN THE NBA: THE SHORT-TERM IMPACT ON PLAYER LONGEVITY AND PERFORMANCE. JOURNAL OF NEUROTRAUMA. 35 (16), A126-A126